VarFish Manual
latest

Projects / Navigation

  • Project Access Control
  • Site-wide Search

Misc UI Features

  • User Menu
  • API Token Management
  • User Profile
  • Import Release Info

Tutorials

  • IGV Configuration
  • VarFish Kiosk Tutorial

Cases & Variants

  • Variants & Cases
  • Variant Statistics & QC
  • Variant Filtration
  • Project-Wide Queries and Stats
  • Variant Annotation

Resources

  • Databases

Administrator's Manual

  • Installation
  • Updating the Database
  • Extra Services
  • System Configuration
  • Ingesting Variants
  • Performance Tuning
  • Upgrade Varfish Installation
  • PAP Configuration
  • Data Backups

Variant Analysis SOPs

  • Introduction
  • Supporting SOPs
  • Variant Filtration SOPs

REST API

  • REST API Overview
  • Project Management API
  • Case Import API
  • Case & Query API
  • JSON Schema
  • Clinical Beacon Protocol

Developer's Manual

  • Installation
  • Installation (Windows)
  • Database Import
  • Development
  • Kiosk
  • Templates (for Issues etc.)
  • Checklists
  • Docker & Data Builds

Notes

  • ClinVar Notes

Project Info

  • Contributors
  • Release Cycle
  • Glossary
  • Small Print
VarFish Manual
  • »
  • Site-wide Search
  • Edit on GitHub

Site-wide Search

You can use the search bar on the top to search the VarFish site for projects and cases.

  • Your search terms are searched for in the project names and descriptions using case-insensitive but exact search. Partial matches are also reported (e.g., “exa” will match a project with “Example” in its name or title but “oxa” will not match).

  • Your search term is searched for in case names and individuals in your cases as follows:

    • Matches are performed case-insensitive (“example” will match “Example”).

    • Non-alphanumeric characters are removed (“#12-345” will match “12345”).

    • Matches have to be end-to-end (“12345” will not match “id12345”).

Search result with one matching case.

Case insensitive search results.

Previous Next

© Copyright 2018-2021, BIH Core Unit Bioinformatics. Revision 7ea4f6c0.

Built with Sphinx using a theme provided by Read the Docs.
Read the Docs v: latest
Versions
latest
stable
Downloads
pdf
html
epub
On Read the Docs
Project Home
Builds